Really strange thay CPU gets warm, when only 3V3_S5 is present.
Could be PCH issue, as you miss PM_SLP_SUS_L I suppose.
I can only think to VCCRTC issue of PCH.
Remove heatsink and tocuh PCH die (small one).
If that heats, most likely VCCRTC problem.
Check resistance to ground on it.
Could be PCH issue, as you miss PM_SLP_SUS_L I suppose.
I can only think to VCCRTC issue of PCH.
Remove heatsink and tocuh PCH die (small one).
If that heats, most likely VCCRTC problem.
Check resistance to ground on it.