Inspect eDP connector very well; sounds like there may possibly be some slightly bent/damaged pins inside. Also compare diode values for data lines on eDP to working board; I've seen a few of these (drops I believe) that had open data lines (and sadly were not repaired). With these symptoms, you should be able to find something off in the diode readings. Make absolutely sure all filters working well; they can be bad but have continuity (rarely--they break super cleanly).
USB not working is odd and may not be related, but "might" hint at a BIOS/ME issue. Could also be SMC or MUX related; check and make sure there's no crack/break in the board near I/O ports. Of course, lots of lines there, and cracked PCB will cause funky issues due to internal shorting.
USB not working is odd and may not be related, but "might" hint at a BIOS/ME issue. Could also be SMC or MUX related; check and make sure there's no crack/break in the board near I/O ports. Of course, lots of lines there, and cracked PCB will cause funky issues due to internal shorting.